MRCluster: Mining constant row bicluster in gene expression data

Miao Miao, Xuequn Shang, Jiacai Liu, Miao Wang

科研成果: 书/报告/会议事项章节会议稿件同行评审

摘要

Biclustering is one of the important techniques for gene expression data analysis. A bicluster is a set of genes coherently expressed for a set of biological conditions. Various biclustering algorithms have been proposed to find biclusters of different types. However, most of them are not efficient. We propose a novel algorithm MRCluster to mine constant row biclusters from real-valued dataset. MRCluster uses Apriori property and several novel pruning techniques to mine biclusters efficiently. We compare our algorithm with a recent approach RAP, and experimental results show that MRCluster is much more efficient than RAP in mining biclusters with constant rows from real-valued gene expression data.

源语言英语
主期刊名Advances in Science and Engineering II
628-633
页数6
DOI
出版状态已出版 - 2012
活动2011 WASE Global Conference on Science Engineering, GCSE 2011 - Taiyuan and Xian, 中国
期限: 10 12月 201111 12月 2011

出版系列

姓名Applied Mechanics and Materials
135-136
ISSN(印刷版)1660-9336
ISSN(电子版)1662-7482

会议

会议2011 WASE Global Conference on Science Engineering, GCSE 2011
国家/地区中国
Taiyuan and Xian
时期10/12/1111/12/11

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