GGANet: A Model for the Prediction of MiRNA-Drug Resistance Based on Contrastive Learning and Global Attention

Zimai Zhang, Bo Wei Zhao, Yu An Huang, Zhu Hong You, Lun Hu, Xi Zhou, Pengwei Hu

科研成果: 书/报告/会议事项章节会议稿件同行评审

摘要

MicroRNAs (miRNAs) play crucial roles in organisms, and recent studies confirm their link to various diseases. The regulatory mechanisms and influence of miRNAs are current research hotspots. Biological experiments require significant time and resources, so we propose a novel model based on the global attention network graph (GGANet), considering multiple features of miRNAs and drugs. It uses clustering contrast learning to enhance information aggregation. (1) We fused multiple features for miRNAs and drugs during initialization to better represent node information. (2) Clustering comparison learning helps nodes learn differences and similarities in hidden features. (3) A global transformer module was used, which can pay attention to local node information while also utilizing the global graph attention mechanism. The model achieved an AUC of 0.9779, AUPR of 0.9771, and F1-score of 0.9615, demonstrating excellent link prediction performance and robustness.

源语言英语
主期刊名Advanced Intelligent Computing in Bioinformatics - 20th International Conference, ICIC 2024, Proceedings
编辑De-Shuang Huang, Qinhu Zhang, Jiayang Guo
出版商Springer Science and Business Media Deutschland GmbH
263-275
页数13
ISBN(印刷版)9789819756889
DOI
出版状态已出版 - 2024
活动20th International Conference on Intelligent Computing , ICIC 2024 - Tianjin, 中国
期限: 5 8月 20248 8月 2024

出版系列

姓名Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
14881 LNBI
ISSN(印刷版)0302-9743
ISSN(电子版)1611-3349

会议

会议20th International Conference on Intelligent Computing , ICIC 2024
国家/地区中国
Tianjin
时期5/08/248/08/24

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