Data-driven Discovery of a Sepsis Patients Severity Prediction in the ICU via Pre-training BiLSTM Networks

Qing Li, L. Frank Huang, Jiang Zhong, Lili Li, Qi Li, Junhao Hu

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

6 Scopus citations

Abstract

Sepsis is the third-highest mortality disease in intensive care units(ICU) and expensive treatment costs, but the best treatment strategy remains uncertain. In this paper, we proposed a pre-training bidirectional LSTM Networks to predict the Sepsis severity of patients in ICU. Most previous models for severity prediction rely on the multi-task recurrent neural networks. In addition, state-of-the-art neural models based on attention mechanisms do not fully utilize information of organ systems that may be the most crucial features for severity prediction. To address these issues, we propose an end-to-end recurrent neural model which incorporates simultaneously analyses different organ systems and intuitively reflect the condition of the patients in a timely fashion. Specifically, we apply a pre-training technique in our model to combines it with labeled data via multi-task learning. Experimental results on the real-world clinical dataset (MIMIC-III), one of the most popular sepsis severity prediction tasks, demonstrate that our model outperforms existing state-of-the-art models.

Original languageEnglish
Title of host publicationProceedings - 2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019
EditorsIllhoi Yoo, Jinbo Bi, Xiaohua Tony Hu
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages668-673
Number of pages6
ISBN (Electronic)9781728118673
DOIs
StatePublished - Nov 2019
Externally publishedYes
Event2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019 - San Diego, United States
Duration: 18 Nov 201921 Nov 2019

Publication series

NameProceedings - 2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019

Conference

Conference2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019
Country/TerritoryUnited States
CitySan Diego
Period18/11/1921/11/19

Keywords

  • Deep Learning
  • Intensive Care Units
  • Sepsis

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