A Structure-Aware Relation Network for Thoracic Diseases Detection and Segmentation

Jie Lian, Jingyu Liu, Shu Zhang, Kai Gao, Xiaoqing Liu, Dingwen Zhang, Yizhou Yu

Research output: Contribution to journalArticlepeer-review

35 Scopus citations

Abstract

Instance level detection and segmentation of thoracic diseases or abnormalities are crucial for automatic diagnosis in chest X-ray images. Leveraging on constant structure and disease relations extracted from domain knowledge, we propose a structure-aware relation network (SAR-Net) extending Mask R-CNN. The SAR-Net consists of three relation modules: 1. the anatomical structure relation module encoding spatial relations between diseases and anatomical parts. 2. the contextual relation module aggregating clues based on query-key pair of disease RoI and lung fields. 3. the disease relation module propagating co-occurrence and causal relations into disease proposals. Towards making a practical system, we also provide ChestX-Det, a chest X-Ray dataset with instance-level annotations (boxes and masks). ChestX-Det is a subset of the public dataset NIH ChestX-ray14. It contains 3500 images of 13 common disease categories labeled by three board-certified radiologists. We evaluate our SAR-Net on it and another dataset DR-Private. Experimental results show that it can enhance the strong baseline of Mask R-CNN with significant improvements.

Original languageEnglish
Article number9395510
Pages (from-to)2042-2052
Number of pages11
JournalIEEE Transactions on Medical Imaging
Volume40
Issue number8
DOIs
StatePublished - Aug 2021

Keywords

  • ChestX-Det
  • SAR-Net
  • Thoracic diseases detection and segmentation

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