Species preserved and exclusive structural connections revealed by sparse CCA

Xiao Li; Lei Du; Tuo Zhang; Xintao Hu; Xi Jiang; Lei Guo; Tianming Liu

doi:10.1007/978-3-319-46720-7_15

Species preserved and exclusive structural connections revealed by sparse CCA

Xiao Li
, Lei Du
, Tuo Zhang
, Xintao Hu
, Xi Jiang
, Lei Guo
, Tianming Liu

School of Automation

Northwestern Polytechnical University Xian
University of Georgia

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Abstract

Brain evolution has been an intriguing research topic for centuries. Efforts have been denoted to identifying structural connectome preserved between macaques and humans and the one exclusive to one species. However,recent studies mainly focus on one specific fasciculus or one region. The similarity and difference of global structural connection network in macaque and human are still largely unknown. In this work,we used diffusion MRI (dMRI) to estimate the whole brain large-scale white matter pathways and Brodmann areas as a test bed to construct a global connectome for the two species. We adopted sparse canonical correlation analysis (SCCA) algorithm to yield the weights which can be applied to the connectome to produce the components strongly correlated between the two species. Joint analysis of the weights helped to identify the preserved white matter pathways and those exclusive to a specific species. The results are consistent with the reports in the literatures,demonstrating the effectiveness and promise of this framework.

Original language	English
Title of host publication	Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 - 19th International Conference, Proceedings
Editors	Sebastian Ourselin, Leo Joskowicz, Mert R. Sabuncu, William Wells, Gozde Unal
Publisher	Springer Verlag
Pages	123-131
Number of pages	9
ISBN (Print)	9783319467191
DOIs	https://doi.org/10.1007/978-3-319-46720-7_15
State	Published - 2016
Event	1st International Workshop on Simulation and Synthesis in Medical Imaging, SASHIMI 2016 held in conjunction with 19th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2016 - Athens, Greece Duration: 21 Oct 2016 → 21 Oct 2016

Publication series

Name	Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume	9900 LNCS
ISSN (Print)	0302-9743
ISSN (Electronic)	1611-3349

Conference

Conference	1st International Workshop on Simulation and Synthesis in Medical Imaging, SASHIMI 2016 held in conjunction with 19th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2016
Country/Territory	Greece
City	Athens
Period	21/10/16 → 21/10/16

Keywords

Diffusion MRI
Large-scale connectome
Species comparison

Access to Document

10.1007/978-3-319-46720-7_15

Cite this

Li, X., Du, L., Zhang, T., Hu, X., Jiang, X., Guo, L., & Liu, T. (2016). Species preserved and exclusive structural connections revealed by sparse CCA. In S. Ourselin, L. Joskowicz, M. R. Sabuncu, W. Wells, & G. Unal (Eds.), Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 - 19th International Conference, Proceedings (pp. 123-131). (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 9900 LNCS). Springer Verlag. https://doi.org/10.1007/978-3-319-46720-7_15

Li, Xiao ; Du, Lei ; Zhang, Tuo et al. / Species preserved and exclusive structural connections revealed by sparse CCA. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 - 19th International Conference, Proceedings. editor / Sebastian Ourselin ; Leo Joskowicz ; Mert R. Sabuncu ; William Wells ; Gozde Unal. Springer Verlag, 2016. pp. 123-131 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).

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abstract = "Brain evolution has been an intriguing research topic for centuries. Efforts have been denoted to identifying structural connectome preserved between macaques and humans and the one exclusive to one species. However,recent studies mainly focus on one specific fasciculus or one region. The similarity and difference of global structural connection network in macaque and human are still largely unknown. In this work,we used diffusion MRI (dMRI) to estimate the whole brain large-scale white matter pathways and Brodmann areas as a test bed to construct a global connectome for the two species. We adopted sparse canonical correlation analysis (SCCA) algorithm to yield the weights which can be applied to the connectome to produce the components strongly correlated between the two species. Joint analysis of the weights helped to identify the preserved white matter pathways and those exclusive to a specific species. The results are consistent with the reports in the literatures,demonstrating the effectiveness and promise of this framework.",

keywords = "Diffusion MRI, Large-scale connectome, Species comparison",

author = "Xiao Li and Lei Du and Tuo Zhang and Xintao Hu and Xi Jiang and Lei Guo and Tianming Liu",

note = "Publisher Copyright: {\textcopyright} Springer International Publishing AG 2016.; 1st International Workshop on Simulation and Synthesis in Medical Imaging, SASHIMI 2016 held in conjunction with 19th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2016 ; Conference date: 21-10-2016 Through 21-10-2016",

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doi = "10.1007/978-3-319-46720-7\_15",

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}

Li, X, Du, L, Zhang, T, Hu, X, Jiang, X, Guo, L & Liu, T 2016, Species preserved and exclusive structural connections revealed by sparse CCA. in S Ourselin, L Joskowicz, MR Sabuncu, W Wells & G Unal (eds), Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 - 19th International Conference, Proceedings. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 9900 LNCS, Springer Verlag, pp. 123-131, 1st International Workshop on Simulation and Synthesis in Medical Imaging, SASHIMI 2016 held in conjunction with 19th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2016, Athens, Greece, 21/10/16. https://doi.org/10.1007/978-3-319-46720-7_15

Species preserved and exclusive structural connections revealed by sparse CCA. / Li, Xiao; Du, Lei; Zhang, Tuo et al.
Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 - 19th International Conference, Proceedings. ed. / Sebastian Ourselin; Leo Joskowicz; Mert R. Sabuncu; William Wells; Gozde Unal. Springer Verlag, 2016. p. 123-131 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 9900 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

TY - GEN

T1 - Species preserved and exclusive structural connections revealed by sparse CCA

AU - Li, Xiao

AU - Du, Lei

AU - Zhang, Tuo

AU - Hu, Xintao

AU - Jiang, Xi

AU - Guo, Lei

AU - Liu, Tianming

N1 - Publisher Copyright: © Springer International Publishing AG 2016.

PY - 2016

Y1 - 2016

N2 - Brain evolution has been an intriguing research topic for centuries. Efforts have been denoted to identifying structural connectome preserved between macaques and humans and the one exclusive to one species. However,recent studies mainly focus on one specific fasciculus or one region. The similarity and difference of global structural connection network in macaque and human are still largely unknown. In this work,we used diffusion MRI (dMRI) to estimate the whole brain large-scale white matter pathways and Brodmann areas as a test bed to construct a global connectome for the two species. We adopted sparse canonical correlation analysis (SCCA) algorithm to yield the weights which can be applied to the connectome to produce the components strongly correlated between the two species. Joint analysis of the weights helped to identify the preserved white matter pathways and those exclusive to a specific species. The results are consistent with the reports in the literatures,demonstrating the effectiveness and promise of this framework.

AB - Brain evolution has been an intriguing research topic for centuries. Efforts have been denoted to identifying structural connectome preserved between macaques and humans and the one exclusive to one species. However,recent studies mainly focus on one specific fasciculus or one region. The similarity and difference of global structural connection network in macaque and human are still largely unknown. In this work,we used diffusion MRI (dMRI) to estimate the whole brain large-scale white matter pathways and Brodmann areas as a test bed to construct a global connectome for the two species. We adopted sparse canonical correlation analysis (SCCA) algorithm to yield the weights which can be applied to the connectome to produce the components strongly correlated between the two species. Joint analysis of the weights helped to identify the preserved white matter pathways and those exclusive to a specific species. The results are consistent with the reports in the literatures,demonstrating the effectiveness and promise of this framework.

KW - Diffusion MRI

KW - Large-scale connectome

KW - Species comparison

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DO - 10.1007/978-3-319-46720-7_15

M3 - 会议稿件

AN - SCOPUS:84996524118

SN - 9783319467191

T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

SP - 123

EP - 131

BT - Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 - 19th International Conference, Proceedings

A2 - Ourselin, Sebastian

A2 - Joskowicz, Leo

A2 - Sabuncu, Mert R.

A2 - Wells, William

A2 - Unal, Gozde

PB - Springer Verlag

T2 - 1st International Workshop on Simulation and Synthesis in Medical Imaging, SASHIMI 2016 held in conjunction with 19th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2016

Y2 - 21 October 2016 through 21 October 2016

ER -

Li X, Du L, Zhang T, Hu X, Jiang X, Guo L et al. Species preserved and exclusive structural connections revealed by sparse CCA. In Ourselin S, Joskowicz L, Sabuncu MR, Wells W, Unal G, editors, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 - 19th International Conference, Proceedings. Springer Verlag. 2016. p. 123-131. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)). doi: 10.1007/978-3-319-46720-7_15

Species preserved and exclusive structural connections revealed by sparse CCA

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Keywords

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