Markov Guided Spatio-Temporal Networks for Brain Image Classification

Yupei Zhang, Yunan Xu, Rui An, Yuxin Li, Shuhui Liu, Xuequn Shang

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

4 Scopus citations

Abstract

This paper proposes a representation learning model to identify task-state fMRIs for knowledge-concept recognition, which has the potential to model the human cognitive expression system. The traditional CNN-LSTM is usually employed to learn deep features from fMRIs, where CNN aims at extracting the spatial structure and LSTM accounts for the temporal structure. However, the manifold smoothness of the latent features caused by the fMRI sequence is often ignored, leading to unsteady data representation. In this paper, we model latent features as a hidden Markov chain and introduce a Markov-guided Spatio-Temporal Network (MSTNet) for brain image representation. Concretely, MSTNet has three parts: CNN that aims to learn latent features from 3D fMRI frames where a Markov Regularization enforces the neighborhood frames to have similar features, LSTM integrates all frames of an fMRI sequence into a feature vector and fully connected network (FCN) that is to implement the brain image classification. Our model is trained towards minimizing the cross entropy (CE) loss. Our experiment is conducted on the brain fMRI datasets achieved by scanning college students when they were learning five concepts of computer science. The results show that the proposed MSTNet can benefit from the introduced Markov regularization and thus result in improved performance on the brain activity classification. This study not only shows an effective fMRI classification model with Markov regularization but also provides the potential to understand brain intelligence and help patients with language disabilities.

Original languageEnglish
Title of host publicationProceedings - 2022 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2022
EditorsDonald Adjeroh, Qi Long, Xinghua Shi, Fei Guo, Xiaohua Hu, Srinivas Aluru, Giri Narasimhan, Jianxin Wang, Mingon Kang, Ananda M. Mondal, Jin Liu
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages2035-2041
Number of pages7
ISBN (Electronic)9781665468190
DOIs
StatePublished - 2022
Event2022 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2022 - Las Vegas, United States
Duration: 6 Dec 20228 Dec 2022

Publication series

NameProceedings - 2022 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2022

Conference

Conference2022 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2022
Country/TerritoryUnited States
CityLas Vegas
Period6/12/228/12/22

Keywords

  • Brain Understanding
  • Concept Learning
  • Convolutional Neural Network
  • fMRI Classification
  • Long-Short-Term-Memory Net
  • Spatio-Temporal Network

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